NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics

Hybrid course

For details about the course, please vist the Course Page

The aim of this workshop is to lay a foundation for the automated application of (bioinformatics) programs. Accordingly, interested biologists and physicians and other people interested, are invited to participate in a hands-on, in-person workshop, where they can become familiar with the Linux environment and its associated landscape, using common bioinformatics tools as examples for creating shell scripts. The last day of the workshop will cover the fundamentals of the Slurm job scheduler, specifically as used in the HZI cluster, although this material is generally applicable.

There will also be time available to allow participants to discuss their own bioinformatics problems. The course assumes no Linux knowledge, and will be taught in English. All participants will receive a certificate of attendance.

Organisers & Instructors

This event is brought to you by:

Organisers(s)

Cordula Almut Selma Hege

For details about the course, please vist the Course Page

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---
title: "NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics"
date: '2024-11-26'
days: 3
tease: The aim of this workshop is to lay a foundation for the automated application of (bioinformatics)
programs. Accordingly, interested biologists and physicians and other
people interested, are invited to participate in a hands-on, in-person workshop,
where they can become familiar with the Linux environment and its associated landscape,
using common bioinformatics tools as examples for creating shell scripts. The last
day of the workshop will cover the fundamentals of the Slurm job scheduler, specifically
as used in the HZI cluster, although this material is generally applicable.

There will also be time available to allow participants to discuss their own bioinformatics
problems. The course assumes no Linux knowledge, and will be taught in English.
All participants will receive a certificate of attendance.

#continent: EU
location: "BRICS building (Rebenring 56, 38106 Braunschweig, GERMANY)"
external_url: "https://training.galaxyproject.org/training-material/events/2024-11-26-nfdi4microbiota-and-dzif-linux-basics-and-scripting-for-bioinformatics.html"
gtn: true
contact: ""
subsites: [all]
---

Promote the Event

Tootable/Tweetable version:

NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics! 📢

The aim of this workshop is to lay a foundation for the automated application of (bioinformatics)
programs. Accordingly, interested biologists and physicians and other
people interested, are invited to participate in a hands-on, in-person workshop,
where they can become familiar with the Linux environment and its associated landscape,
using common bioinformatics tools as examples for creating shell scripts. The last
day of the workshop will cover the fundamentals of the Slurm job scheduler, specifically
as used in the HZI cluster, although this material is generally applicable.

There will also be time available to allow participants to discuss their own bioinformatics
problems. The course assumes no Linux knowledge, and will be taught in English.
All participants will receive a certificate of attendance.


📅 November 26 – 28, 2024
➡️ https://training.galaxyproject.org/training-material/events/2024-11-26-nfdi4microbiota-and-dzif-linux-basics-and-scripting-for-bioinformatics.html

Slack-compatible version:

NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics! 📢

The aim of this workshop is to lay a foundation for the automated application of (bioinformatics)
programs. Accordingly, interested biologists and physicians and other
people interested, are invited to participate in a hands-on, in-person workshop,
where they can become familiar with the Linux environment and its associated landscape,
using common bioinformatics tools as examples for creating shell scripts. The last
day of the workshop will cover the fundamentals of the Slurm job scheduler, specifically
as used in the HZI cluster, although this material is generally applicable.

There will also be time available to allow participants to discuss their own bioinformatics
problems. The course assumes no Linux knowledge, and will be taught in English.
All participants will receive a certificate of attendance.


:calendar: November 26 – 28, 2024
:arrow_right: https://training.galaxyproject.org/training-material/events/2024-11-26-nfdi4microbiota-and-dzif-linux-basics-and-scripting-for-bioinformatics.html

Version with schedule:

NFDI4Microbiota and DZIF: Linux basics and scripting for bioinformatics! 📢

The aim of this workshop is to lay a foundation for the automated application of (bioinformatics)
programs. Accordingly, interested biologists and physicians and other
people interested, are invited to participate in a hands-on, in-person workshop,
where they can become familiar with the Linux environment and its associated landscape,
using common bioinformatics tools as examples for creating shell scripts. The last
day of the workshop will cover the fundamentals of the Slurm job scheduler, specifically
as used in the HZI cluster, although this material is generally applicable.

There will also be time available to allow participants to discuss their own bioinformatics
problems. The course assumes no Linux knowledge, and will be taught in English.
All participants will receive a certificate of attendance.


**Agenda**:

📅 November 26 – 28, 2024
➡️ https://training.galaxyproject.org/training-material/events/2024-11-26-nfdi4microbiota-and-dzif-linux-basics-and-scripting-for-bioinformatics.html

Event details

event-date	November 26 – 28, 2024
event-location	BRICS building (Rebenring 56, 38106 Braunschweig, GERMANY)

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Organisers

Cordula Almut Selma Hege

Zhi-Luo Deng

Gary Robertson

Hesham Almessady

In collaboration with

NFDI4Microbiota