Workflows
These workflows are associated with Identifying tuberculosis transmission links: from SNPs to transmission clusters
To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.
| Workflow | Updated | Import | Has Tests | Tested | License | Creators |
|---|---|---|---|---|---|---|
| Galaxy-Workflow-From_BAMs_to_drug_resistance_prediction_with_TB-profiler.ga | Mar 16, 2022 |
Launch in Tutorial Mode
What is tutorial mode?
|
❌ | ❌ | None Specified, defaults to CC-BY-4.0 | |
| Galaxy-Workflow-From_Fastqs_to_VCFs_and_BAMs.ga | Mar 16, 2022 |
Launch in Tutorial Mode
What is tutorial mode?
|
❌ | ❌ | None Specified, defaults to CC-BY-4.0 | |
| main_workflow.ga | Mar 16, 2022 |
Launch in Tutorial Mode
What is tutorial mode?
|
❌ | ❌ | None Specified, defaults to CC-BY-4.0 |
Importing into Galaxy
Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!Hands-on: Importing a workflow
- Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
- Click on galaxy-upload Import at the top-right of the screen
- Provide your workflow
- Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
- Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
- Click the Import workflow button