Development in Galaxy

Galaxy is an open-source project. Everyone can contribute to its development with core Galaxy development, integration of softwares in Galaxy environment, ...

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Material

Core

These are the core, foundational topics for Galaxy development.

Lesson Slides Hands-on Recordings
Galaxy from a developer point of view
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Contributing a New Feature to Galaxy Core
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Debugging Galaxy
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Galaxy Code Architecture
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Writing Automated Tests for Galaxy
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API

Interacting with the Galaxy API

Lesson Slides Hands-on Recordings
Contributing to BioBlend as a developer
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Scripting Galaxy using the API and BioBlend
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Dependencies

These topics include information on how dependencies work in Galaxy and how to construct them.

Lesson Slides Hands-on Recordings
Prerequisites for building software/conda packages
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Tool Dependencies and Conda
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Tool Dependencies and Containers
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Tool Development

Here you can learn everything about tool development in the Galaxy Ecosystem

Lesson Slides Hands-on Recordings
Creating Galaxy tools from Conda Through Deployment
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Galaxy Interactive Tools
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Tool development and integration into Galaxy
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Tool Shed: sharing Galaxy tools
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ToolFactory: Generating Tools From More Complex Scripts
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ToolFactory: Generating Tools From Simple Scripts
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Viz

Visualizations in Galaxy give you the ability to implement Javascript apps into Galaxy to analyse and visualise data.

Lesson Slides Hands-on Recordings
Generic plugins
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JavaScript plugins
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Advanced Features

These are more advanced features of Galaxy which you might want to develop for as they greatly expand the abilities of Galaxy.

Lesson Slides Hands-on Recordings
Data source integration
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Galaxy Interactive Tours
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Galaxy Webhooks
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Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Maintainers

This material is maintained by:

AvatarGildas Le Corguillé orcid logoAvatarBérénice Batut orcid logoAvatarHelena Rasche

For any question related to this topic and the content, you can contact them or visit our Gitter channel.

Contributors

This material was contributed to by:

orcid logoAvatarBérénice Batut orcid logoAvatarJohn Chilton AvatarJohn Davis AvatarErik Schill AvatarSimon Bray AvatarAlex Ostrovsky AvatarDave B. AvatarMatthias Bernt orcid logoAvatarSaskia Hiltemann AvatarGianmauro Cuccuru orcid logoAvatarHelena Rasche AvatarAssunta DeSanto orcid logoAvatarBjörn Grüning AvatarEstelle Ancelet orcid logoAvatarYvan Le Bras orcid logoAvatarCameron Hyde AvatarLain Pavot orcid logoAvatarAnthony Bretaudeau AvatarClemens Blank AvatarMartin Čech AvatarYouri Hoogstrate AvatarAysam Guerler AvatarDannon Baker AvatarCyril Monjeaud orcid logoAvatarNicola Soranzo AvatarHervé Ménager AvatarGildas Le Corguillé AvatarLoraine Guéguen AvatarStéphanie Legras AvatarRoss Lazarus