Anthony Bretaudeau

Contributions

The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.)

Tutorials

• Transcriptomics / RNA-Seq analysis with AskOmics Interactive Tool
• Transcriptomics / De novo transcriptome assembly, annotation, and differential expression analysis
• Galaxy Server administration / Galaxy Interactive Tools
• Genome Annotation / Genome annotation with Maker
• Genome Annotation / Refining Genome Annotations with Apollo
• Genome Annotation / Genome annotation with Maker (short)

Slides

• Genome Annotation / Introduction to Genome Annotation
• Transcriptomics / Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• Galaxy Server administration / Galaxy Interactive Tools
• Introduction to Galaxy Analyses / Options for using Galaxy
• Development in Galaxy / Tool development and integration into Galaxy
• Development in Galaxy / Tool Shed: sharing Galaxy tools
• Development in Galaxy / Prerequisites for building software/conda packages
• Genome Annotation / Refining Genome Annotations with Apollo
• Assembly / Deeper look into Genome Assembly algorithms