Anthony Bretaudeau

Contributions

The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.)

Tutorials

• Transcriptomics / De novo transcriptome assembly, annotation, and differential expression analysis
• Transcriptomics / RNA-Seq analysis with AskOmics Interactive Tool
• Galaxy Server administration / Galaxy Interactive Tools
• Genome Annotation / Genome annotation with Maker (short)
• Genome Annotation / Genome annotation with Maker
• Genome Annotation / Refining Genome Annotations with Apollo

Slides

• Genome Annotation / Introduction to Genome Annotation
• Development in Galaxy / Tool Shed: sharing Galaxy tools
• Development in Galaxy / Prerequisites for building software/conda packages
• Development in Galaxy / Tool development and integration into Galaxy
• Transcriptomics / Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• Galaxy Server administration / Galaxy Interactive Tools
• Assembly / Deeper look into Genome Assembly algorithms
• Genome Annotation / Refining Genome Annotations with Apollo
• Introduction to Galaxy Analyses / Options for using Galaxy